Journal: Frontiers in Immunology
Article Title: Simian Immunodeficiency Virus Infection Mediated Changes in Jejunum and Peripheral SARS-CoV-2 Receptor ACE2 and Associated Proteins or Genes in Rhesus Macaques
doi: 10.3389/fimmu.2022.835686
Figure Lengend Snippet: Global transcriptomic profiling of enteroids from infected and uninfected RMs. Enteroids were grown after isolating crypts from the jejunum and total RNA was isolated for the RNA-seq analysis. (A) PCA plot of enteroids from 5 uninfected (JK56, KA42, KA76, KA78, and KP54) and 5 chronically infected RMs (KA42, KA78, KP54, KH79, and KM05) revealed a clear separation between infected RMs and uninfected controls, along with the first principal component (PC1) with 43% of the total variance and the second principal component (PC2) with 25%. (B) Heatmap of differentially expressed genes (DEGs) from enteroids which encode RAS-related proteins, arranged from smallest to largest adjusted p-values. Note that there were no significant differences in TMPRSS2 , AGTR1 , AGTR2 , and AGT gene expression between infected and uninfected enteroids. P- and C-suffix of animal numbers at the bottom of Heatmap denote pre and chronic infection time points, respectively. Spearman’s rank correlation coefficient of determination between ACE2 and DPP4 gene expression (C) , ACE2 and MME gene expression (D) , ACE2 and ANPEP gene expression (E) , and ACE2 and ENPEP gene expression (F) is shown for all 5 uninfected and 5 infected macaques. Strong significantly positive correlations were detected between decreased ACE gene expression and reduction of DPP4 , ANPEP , or ENPEP expression in enteroids. A positive correlation was also detected between ACE2 and MME gene expression, but it was not statistically significant. (C-F) Green and red circles represent pre and chronic infection timepoints, respectively.
Article Snippet: Tissue sections of 5 μM thickness were stained by incubating for 1h with rabbit polyclonal anti-ACE2 antibodies (Sino Biologicals, USA), then washed and stained for 40 min with Alexa Flour 568-conjugated secondary antibodies (Life Technologies, USA) ( ).
Techniques: Infection, Isolation, RNA Sequencing Assay, Expressing